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On May 3, 2016, the Tropics, in conjunction with the newly formed IPL, held a press conference at the RP Funding Center and stated they would be joining the IPL alongside the Baltimore Blast, Harrisburg Heat, and St. Louis Ambush. However, on August 29, 2016, it was announced that all IPL teams including Florida would be joining the MASL. The team finished 3rd in their division in their inaugural season, and averaged over 2,500 fans a game including one sell out. In their second season in the MASL, the Tropics again fell just short of the playoffs, finishing 3rd in the Eastern Division. It was in 2017 that the club fielded their first USL League Two franchise, and in 2019 a new squad was created to play in the UPSL Pro Premier Florida Division, who went on to win the leagues national championship. The official supporter group of the Tropics organization is the Swan City Syndicate.

The Tropics succeed the Tampa Bay area as the local indoor soccer club. The team is unrelated to the original Tampa Bay Rowdies, who were notorious for their indoor soccer success, as well as their outdoor. A current Rowdies team began to play in 2010 and is also unrelated to that club; the team exclusively plays outdoor soccer. Indoor soccer by the original Rowdies had officially ended when the team played in the American Indoor Soccer Association for one season (1986–87). For two seasons, another Tampa Bay area team played in the same league, from 1995 to 1997, called the Tampa Bay Terror; however, the team did not last more than two seasons, despite having some members of the Rowdies on the roster. It would not be until the Tropics first season that indoor soccer would return to the area.

On April 21, 2023, it was announced that the Tropics would no longer play Major Arena Soccer League games in Lakeland. The team cited the rising cost of rent at the RP Funding Center. Three months later, on July 12, 2023, the Major Arena Soccer League announced the Tropics would be suspended for the 2023-24 Major Arena Soccer League season, while the MASL would work with Tropics ownership to resume play in 2024-25.